A database for publications published by researchers and students at SimulaMet.
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- Journal articles (130)
- Books (2)
- Edited books (1)
- Proceedings, refereed (167)
- Book chapters (6)
- Talks, keynote (1)
- PhD theses (5)
- Proceedings, non-refereed (2)
- Posters (6)
- Talks, invited (16)
- Talks, contributed (15)
- Public outreach (3)
- Master's theses (1)
- Miscellaneous (8)
Journal articles
Training Performance Indications for Amateur Athletes Based on Nutrition and Activity Lifelogs
Algorithms, no. 1 (2023): 30.Status: Published
Training Performance Indications for Amateur Athletes Based on Nutrition and Activity Lifelogs
Afilliation | Machine Learning |
Project(s) | Department of Holistic Systems |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | Algorithms |
Issue | 1 |
Pagination | 30 |
Date Published | Jan-01-2023 |
Publisher | MDPI |
URL | https://www.mdpi.com/1999-4893/16/1/30 |
DOI | 10.3390/a16010030 |
MatCoupLy: Learning coupled matrix factorizations with Python
SoftwareX 21, no. 101294 (2023).Status: Published
MatCoupLy: Learning coupled matrix factorizations with Python
Afilliation | Machine Learning |
Project(s) | Department of Data Science and Knowledge Discovery |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | SoftwareX |
Volume | 21 |
Issue | 101294 |
Date Published | Feb-01-2023 |
Publisher | Elsevier |
ISSN | 2352-7110 |
URL | https://linkinghub.elsevier.com/retrieve/pii/Shttps://www.sciencedirect.... |
DOI | 10.1016/j.softx.2022.101292 |
A multi-center polyp detection and segmentation dataset for generalisability assessment
Nature Scientific Data 10 (2023).Status: Published
A multi-center polyp detection and segmentation dataset for generalisability assessment
Afilliation | Machine Learning |
Project(s) | Department of Holistic Systems |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | Nature Scientific Data |
Volume | 10 |
Publisher | Nature |
URL | https://doi.org/10.1038/s41597-023-01981-y |
DOI | 10.1038/s41597-023-01981-y |
Approximate Bayesian Inference Based on Expected Evaluation
Bayesian Analysis 1, no. 1 (2023).Status: Published
Approximate Bayesian Inference Based on Expected Evaluation
Approximate Bayesian computing (ABC) and Bayesian Synthetic likelihood (BSL) are two popular families of methods to evaluate the posterior distribution when the likelihood function is not available or tractable. For existing variants of ABC and BSL, the focus is usually first put on the simulation algorithm, and after that the form of the resulting approximate posterior distribution comes as a consequence of the algorithm. In this paper we turn this around and firstly define a reasonable approximate posterior distribution by studying the distributional properties of the expected discrepancy, or more generally an expected evaluation, with respect to generated samples from the model. The resulting approximate posterior distribution will be on a simple and interpretable form compared to ABC and BSL.
Secondly a Markov chain Monte Carlo (MCMC) algorithm is developed to simulate from the resulting approximate posterior distribution. The algorithm was evaluated on a synthetic data example and on the Stepping Stone population genetics model, demonstrating that the proposed scheme has real world applicability. The algorithm demonstrates competitive results with the BSL and sequential Monte Carlo ABC algorithms, but is outperformed by the ABC MCMC.
Afilliation | Communication Systems, Machine Learning |
Project(s) | Department of Holistic Systems |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | Bayesian Analysis |
Volume | 1 |
Issue | 1 |
Date Published | Jan-01-2023 |
Publisher | Project euclid |
URL | https://projecteuclid.org/journals/bayesian-analysis/volume--1/issue--1/... |
DOI | 10.1214/23-BA1368 |
Distributed Linear Network Operators via Successive Graph Shift Matrices
IEEE Transactions on Signal and Information Processing over Networks 9 (2023): 315-328.Status: Published
Distributed Linear Network Operators via Successive Graph Shift Matrices
Afilliation | Machine Learning |
Project(s) | Signal and Information Processing for Intelligent Systems |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | IEEE Transactions on Signal and Information Processing over Networks |
Volume | 9 |
Pagination | 315-328 |
Date Published | 04/2023 |
Publisher | IEEE Transactions on Signal and Information Processing over Networks |
ISSN | 2373-776X |
Notes | This work is a joint collaboration between SimulaMet and University of Agder. This work was supported by the PETROMAKS Smart-Rig grant 244205 and the IKTPLUSS INDURB grant 270730/O70 from the Research Council of Norway. |
DOI | 10.1109/TSIPN.2023.3271148 |
Sparse Online Learning with Kernels using Random Features for Estimating Nonlinear Dynamic Graphs
IEEE Transactions on Signal Processing 71 (2023): 2027-2042.Status: Published
Sparse Online Learning with Kernels using Random Features for Estimating Nonlinear Dynamic Graphs
Online topology estimation of graph-connected time series is challenging in practice, particularly because the dependencies between the time series in many real-world scenarios are nonlinear. To address this challenge, we introduce a novel kernel-based algorithm for online graph topology estimation. Our proposed algorithm also performs a Fourier-based random feature approximation to tackle the curse of dimensionality associated with kernel representations. Exploiting the fact that real-world networks often exhibit sparse topologies, we propose a group-Lasso based optimization framework, which is solved using an iterative composite objective mirror descent method, yielding an online algorithm with fixed computational complexity per iteration. We provide theoretical guarantees for our algorithm and prove that it can achieve sublinear dynamic regret under certain reasonable assumptions. In experiments conducted on both real and synthetic data, our method outperforms existing state-of-the-art competitors.
Afilliation | Machine Learning |
Project(s) | Signal and Information Processing for Intelligent Systems |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | IEEE Transactions on Signal Processing |
Volume | 71 |
Pagination | 2027-2042 |
Date Published | 06/2023 |
Publisher | IEEE |
ISSN | 1941-0476 |
Other Numbers | Print ISSN: 1053-587X |
Notes | This work is a joint collaboration between SimulaMet and University of Agder. This work was supported by the IKTPLUSS INDURB grant 270730/O70 and the SFI Offshore Mechatronics grant 237896/O30 from the Research Council of Norway. |
URL | https://ieeexplore.ieee.org/document/10141675 |
DOI | 10.1109/TSP.2023.3282068 |
Enhancing Questioning Skills through Child Avatar Chatbot Training with Feedback
Frontiers in Psychology (2023).Status: Published
Enhancing Questioning Skills through Child Avatar Chatbot Training with Feedback
Afilliation | Machine Learning |
Project(s) | Department of Holistic Systems |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | Frontiers in Psychology |
Publisher | Frontiers |
DOI | 10.3389/fpsyg.2023.1198235 |
Usefulness of Heat Map Explanations for Deep-Learning-Based Electrocardiogram Analysis
Diagnostics 13, no. 14 (2023).Status: Published
Usefulness of Heat Map Explanations for Deep-Learning-Based Electrocardiogram Analysis
Deep neural networks are complex machine learning models that have shown promising results in analyzing high-dimensional data such as those collected from medical examinations. Such models have the potential to provide fast and accurate medical diagnoses. However, the high complexity makes deep neural networks and their predictions difficult to understand. Providing model explanations can be a way of increasing the understanding of “black box” models and building trust. In this work, we applied transfer learning to develop a deep neural network to predict sex from electrocardiograms. Using the visual explanation method Grad-CAM, heat maps were generated from the model in order to understand how it makes predictions. To evaluate the usefulness of the heat maps and determine if the heat maps identified electrocardiogram features that could be recognized to discriminate sex, medical doctors provided feedback. Based on the feedback, we concluded that, in our setting, this mode of explainable artificial intelligence does not provide meaningful information to medical doctors and is not useful in the clinic. Our results indicate that improved explanation techniques that are tailored to medical data should be developed before deep neural networks can be applied in the clinic for diagnostic purposes.
Afilliation | Machine Learning |
Project(s) | Department of Holistic Systems |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | Diagnostics |
Volume | 13 |
Issue | 14 |
Number | 2345 |
Date Published | 07/2023 |
Publisher | MDPI |
Keywords | electrocardiograms, Explainable artificial intelligence, heat maps |
DOI | 10.3390/diagnostics13142345 |
Unsupervised EHR-based Phenotyping via Matrix and Tensor Decompositions
WIREs Data Mining and Knowledge Discovery 13 (2023).Status: Published
Unsupervised EHR-based Phenotyping via Matrix and Tensor Decompositions
Afilliation | Machine Learning |
Project(s) | Department of Data Science and Knowledge Discovery , DeCipher |
Publication Type | Journal Article |
Year of Publication | 2023 |
Journal | WIREs Data Mining and Knowledge Discovery |
Volume | 13 |
Number | e1494 |
Publisher | Wiley |
DOI | 10.1002/widm.1494 |
Posters
PARAFAC2-based coupled matrix and tensor factorizations with constraints
IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). IEEE, 2023.Status: Published
PARAFAC2-based coupled matrix and tensor factorizations with constraints
Afilliation | Machine Learning |
Project(s) | Department of Data Science and Knowledge Discovery |
Publication Type | Poster |
Year of Publication | 2023 |
Place Published | IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP). IEEE |